RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g42930.2 View Network Show in Genome Browser |
| Other Names | Os04g0508300 |
| Description | OsGrx_C2.2 - glutaredoxin subgroup I, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25396939-25399457 Nucleotide Length: 342 |
| Protein-coding | LOC_Os04g42930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63420 LOC_Os04g17050 LOC_Os03g07910 LOC_Os03g58630 LOC_Os01g49710 LOC_Os01g49720 LOC_Os01g37750 LOC_Os01g72150 LOC_Os03g39850 LOC_Os01g72130 LOC_Os01g72170 More.. |
| Downstream Genes | LOC_Os12g10200 LOC_Os07g12640 LOC_Os07g09310 LOC_Os10g38660 LOC_Os10g38670 LOC_Os10g38489 LOC_Os10g38160 LOC_Os06g10420 LOC_Os10g38470 LOC_Os10g38360 LOC_Os10g38580 More.. |
| Reference | |
|---|---|
| PubMed | 21044985 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g42930.2 |
| Rice Genome Annotation | LOC_Os04g42930.2 |
| Ricechip | LOC_Os04g42930.2 |
| KEGG | osa:4336354 dosa:Os04t0508300-01 |
| Entrez-Gene | 4336354 |