RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43030.1 View Network Show in Genome Browser |
| Other Names | Os04g0509100 |
| Description | lipase class 3 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25460247-25468576 Nucleotide Length: 2613 |
| Protein-coding | LOC_Os04g43030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g28040 LOC_Os01g67420 LOC_Os01g43140 LOC_Os02g54010 LOC_Os01g20840 |
| Downstream Genes | LOC_Os09g39790 LOC_Os09g22450 LOC_Os05g49840 LOC_Os11g09010 LOC_Os06g14490 LOC_Os06g44500 |
| Pathways | |
|---|---|
| Metacyc Pathways | LIPAS-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43030.1 |
| Rice Genome Annotation | LOC_Os04g43030.1 |
| Ricechip | LOC_Os04g43030.1 |
| KEGG | osa:4336360 dosa:Os04t0509100-00 |
| Entrez-Gene | 4336360 |