RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43170.1 View Network Show in Genome Browser |
| Other Names | Os04g0510900 |
| Description | caleosin related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25554735-25556460 Nucleotide Length: 858 |
| Protein-coding | LOC_Os04g43170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10110 LOC_Os03g46100 LOC_Os04g32080 LOC_Os02g15178 LOC_Os02g15169 LOC_Os03g57960 |
| Downstream Genes | LOC_Os11g37270 LOC_Os09g15520 LOC_Os04g46200 LOC_Os07g11330 LOC_Os07g15540 LOC_Os09g30240 LOC_Os07g11380 LOC_Os07g11360 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43170.1 |
| Rice Genome Annotation | LOC_Os04g43170.1 |
| Ricechip | LOC_Os04g43170.1 |
| KEGG | osa:9267086 dosa:Os04t0510900-01 |
| Entrez-Gene | 9267086 |