RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43210.2 View Network Show in Genome Browser |
| Other Names | Os04g0511400 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25567693-25571462 Nucleotide Length: 1746 |
| Protein-coding | LOC_Os04g43210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g09250 LOC_Os01g22710 LOC_Os01g16260 LOC_Os01g17214 LOC_Os01g10240 LOC_Os03g17990 LOC_Os02g44730 LOC_Os04g42490 LOC_Os03g17700 LOC_Os04g41460 LOC_Os04g10750 More.. |
| Downstream Genes | LOC_Os07g42600 LOC_Os10g22450 LOC_Os07g05640 LOC_Os07g37510 LOC_Os04g53930 LOC_Os07g37530 LOC_Os12g03860 LOC_Os11g04030 LOC_Os11g04020 LOC_Os11g05390 LOC_Os11g04104 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43210.2 |
| Rice Genome Annotation | LOC_Os04g43210.2 |
| Ricechip | LOC_Os04g43210.2 |
| KEGG | osa:4336377 dosa:Os04t0511400-01 |
| Entrez-Gene | 4336377 |