RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43360.1 View Network Show in Genome Browser |
| Other Names | Os04g0513100 |
| Description | Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25640268-25644607 Nucleotide Length: 1551 |
| Protein-coding | LOC_Os04g43360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38810 LOC_Os04g04400 LOC_Os01g08750 LOC_Os01g56130 LOC_Os02g48320 LOC_Os02g32970 |
| Downstream Genes | LOC_Os05g43530 LOC_Os06g49530 LOC_Os08g42020 LOC_Os11g29200 LOC_Os12g24250 LOC_Os09g26260 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 rn01110 rn00460 rn00940 |
| Metacyc Pathways | PWY-5176 PWY-4441 PWY-3121 PWY-6002 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43360.1 |
| Rice Genome Annotation | LOC_Os04g43360.1 |
| Ricechip | LOC_Os04g43360.1 |
| KEGG | osa:4336388 dosa:Os04t0513100-01 |
| Entrez-Gene | 4336388 |