RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43650.2 View Network Show in Genome Browser |
| Other Names | Os04g0516600 |
| Description | L-allo-threonine aldolase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25826665-25830700 Nucleotide Length: 1119 |
| Protein-coding | LOC_Os04g43650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52840 LOC_Os03g06200 LOC_Os03g18130 LOC_Os02g58510 LOC_Os03g02030 LOC_Os01g62900 LOC_Os03g20560 LOC_Os02g38980 LOC_Os02g13140 LOC_Os01g72940 LOC_Os02g03260 More.. |
| Downstream Genes | LOC_Os09g16910 LOC_Os10g10244 LOC_Os06g15420 LOC_Os08g10600 LOC_Os08g39300 LOC_Os12g13320 LOC_Os04g52370 LOC_Os07g09720 LOC_Os05g38150 LOC_Os08g34720 LOC_Os06g07978 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43650.2 |
| Rice Genome Annotation | LOC_Os04g43650.2 |
| Ricechip | LOC_Os04g43650.2 |
| KEGG | osa:4336402 dosa:Os04t0516600-01 |
| Entrez-Gene | 4336402 |