RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43700.1 View Network Show in Genome Browser |
| Other Names | Os04g0517400 |
| Description | glycosyl transferase 8 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25860364-25865216 Nucleotide Length: 1083 |
| Protein-coding | LOC_Os04g43700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18890 LOC_Os01g52710 LOC_Os01g63270 LOC_Os03g24510 LOC_Os02g50600 LOC_Os03g47530 LOC_Os03g11330 LOC_Os02g02560 LOC_Os03g57430 LOC_Os03g30000 LOC_Os02g29530 More.. |
| Downstream Genes | LOC_Os09g38030 LOC_Os04g44850 LOC_Os07g45260 LOC_Os06g13760 LOC_Os10g11140 LOC_Os12g38930 LOC_Os10g31650 LOC_Os08g23780 LOC_Os06g49810 LOC_Os09g36190 LOC_Os04g54360 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43700.1 |
| Rice Genome Annotation | LOC_Os04g43700.1 |
| Ricechip | LOC_Os04g43700.1 |
| KEGG | osa:4336409 dosa:Os04t0517400-01 |
| Entrez-Gene | 4336409 |