RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43750.2 View Network Show in Genome Browser |
| Other Names | Os04g0518000 |
| Description | kinase, pfkB family, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25898097-25902365 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os04g43750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50350 LOC_Os02g05330 LOC_Os03g22880 LOC_Os03g22740 LOC_Os01g51380 LOC_Os03g22730 LOC_Os02g49270 LOC_Os03g62490 LOC_Os02g57590 LOC_Os03g20750 LOC_Os03g54790 More.. |
| Downstream Genes | LOC_Os12g13390 LOC_Os07g15880 LOC_Os06g48750 LOC_Os09g07820 LOC_Os12g40830 LOC_Os06g37180 LOC_Os05g49150 LOC_Os08g23730 LOC_Os11g26850 LOC_Os05g08360 LOC_Os07g30150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43750.2 |
| Rice Genome Annotation | LOC_Os04g43750.2 |
| Ricechip | LOC_Os04g43750.2 |
| KEGG | osa:4336412 dosa:Os04t0518000-01 |
| Entrez-Gene | 4336412 |