RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g43760.2 View Network Show in Genome Browser |
| Other Names | Os04g0518100 |
| Description | phenylalanine ammonia-lyase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 25906849-25910074 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os04g43760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19970 LOC_Os04g36740 LOC_Os01g46980 LOC_Os02g45344 LOC_Os03g16920 LOC_Os02g01010 LOC_Os03g48300 LOC_Os02g02700 LOC_Os03g19410 LOC_Os03g17700 LOC_Os04g32020 More.. |
| Downstream Genes | LOC_Os04g43770 LOC_Os05g24550 LOC_Os06g06090 LOC_Os07g49520 LOC_Os11g09280 LOC_Os06g08770 LOC_Os04g55720 LOC_Os10g38950 LOC_Os09g26880 LOC_Os08g06060 LOC_Os06g14030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g43760.2 |
| Rice Genome Annotation | LOC_Os04g43760.2 |
| Ricechip | LOC_Os04g43760.2 |
| KEGG | osa:4336413 dosa:Os04t0518100-01 |
| Entrez-Gene | 4336413 |