RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g44060.1 View Network Show in Genome Browser |
| Other Names | Os04g0521100 |
| Description | aquaporin protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26099273-26101782 Nucleotide Length: 873 |
| Protein-coding | LOC_Os04g44060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60260 LOC_Os01g07760 LOC_Os03g20410 LOC_Os02g12740 LOC_Os02g34510 LOC_Os01g42430 LOC_Os01g73130 LOC_Os01g65986 LOC_Os02g57720 LOC_Os02g44630 LOC_Os02g41860 More.. |
| Downstream Genes | LOC_Os07g12770 LOC_Os10g38060 LOC_Os05g07880 LOC_Os08g39300 LOC_Os11g06890 LOC_Os05g01560 LOC_Os05g05200 LOC_Os11g48020 LOC_Os07g01150 LOC_Os06g12580 LOC_Os05g35060 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g44060.1 |
| Rice Genome Annotation | LOC_Os04g44060.1 |
| Ricechip | LOC_Os04g44060.1 |
| KEGG | osa:4336424 dosa:Os04t0521100-01 |
| Entrez-Gene | 4336424 |