RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g44260.1 View Network Show in Genome Browser |
| Other Names | Os04g0524136 |
| Description | thioredoxin reductase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26218187-26218732 Nucleotide Length: 546 |
| Protein-coding | LOC_Os04g44260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19450 LOC_Os02g33420 LOC_Os01g73234 LOC_Os03g10190 LOC_Os01g37837 |
| Downstream Genes | LOC_Os06g45510 LOC_Os08g33540 LOC_Os05g37434 LOC_Os12g07350 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00450 rn00240 |
| Metacyc Pathways | THIOREDOX-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g44260.1 |
| Rice Genome Annotation | LOC_Os04g44260.1 |
| Ricechip | LOC_Os04g44260.1 |
| KEGG | dosa:Os04t0524136-00 |