RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g44420.1 View Network Show in Genome Browser |
| Other Names | Os04g0525800 |
| Description | isochorismatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26296166-26296639 Nucleotide Length: 474 |
| Protein-coding | LOC_Os04g44420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39400 LOC_Os03g10110 LOC_Os02g42650 |
| Downstream Genes | LOC_Os08g27070 |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g44420.1 |
| Rice Genome Annotation | LOC_Os04g44420.1 |
| Ricechip | LOC_Os04g44420.1 |
| KEGG | dosa:Os04t0525800-00 |