RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g44820.2 View Network Show in Genome Browser |
| Other Names | Os04g0530500 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26532535-26535961 Nucleotide Length: 762 |
| Protein-coding | LOC_Os04g44820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08310 LOC_Os03g55670 LOC_Os03g32790 LOC_Os04g38570 LOC_Os04g01230 |
| Downstream Genes | LOC_Os11g44810 LOC_Os11g14140 LOC_Os11g05170 LOC_Os04g58280 LOC_Os04g57800 LOC_Os12g05210 LOC_Os06g05550 LOC_Os09g36520 |
| Reference | |
|---|---|
| PubMed | 21497713 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g44820.2 |
| Rice Genome Annotation | LOC_Os04g44820.2 |
| Ricechip | LOC_Os04g44820.2 |
| KEGG | osa:4336483 dosa:Os04t0530500-01 |
| Entrez-Gene | 4336483 |