RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g44890.2 View Network Show in Genome Browser |
| Other Names | Os04g0531300 |
| Description | tRNA-dihydrouridine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26565521-26571284 Nucleotide Length: 960 |
| Protein-coding | LOC_Os04g44890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45660 LOC_Os02g12600 LOC_Os03g61750 LOC_Os01g05840 LOC_Os01g56560 LOC_Os03g06190 LOC_Os04g22380 LOC_Os02g41470 LOC_Os04g22390 LOC_Os01g66360 LOC_Os03g38980 More.. |
| Downstream Genes | LOC_Os06g06730 LOC_Os11g07930 LOC_Os11g07922 LOC_Os05g41800 LOC_Os06g16430 LOC_Os08g10570 LOC_Os12g08740 LOC_Os09g28940 LOC_Os07g44640 LOC_Os09g39670 LOC_Os10g40030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g44890.2 |
| Rice Genome Annotation | LOC_Os04g44890.2 |
| Ricechip | LOC_Os04g44890.2 |
| KEGG | osa:4336488 dosa:Os04t0531300-01 |
| Entrez-Gene | 4336488 |