RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g45200.1 View Network Show in Genome Browser |
| Other Names | Os04g0534500 |
| Description | DNA binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26716419-26719506 Nucleotide Length: 1155 |
| Protein-coding | LOC_Os04g45200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g45830 LOC_Os01g52010 LOC_Os01g09430 LOC_Os03g63660 LOC_Os01g51980 LOC_Os01g66150 LOC_Os03g61760 LOC_Os03g53300 LOC_Os01g01160 LOC_Os04g31050 LOC_Os02g19150 More.. |
| Downstream Genes | LOC_Os09g04440 LOC_Os06g05890 LOC_Os12g19530 LOC_Os10g25030 LOC_Os08g38700 LOC_Os09g17620 LOC_Os09g35730 LOC_Os12g32970 LOC_Os06g03540 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g45200.1 |
| Rice Genome Annotation | LOC_Os04g45200.1 |
| Ricechip | LOC_Os04g45200.1 |
| KEGG | osa:4336510 dosa:Os04t0534500-01 |
| Entrez-Gene | 4336510 |