RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g45280.2 View Network Show in Genome Browser |
| Other Names | Os04g0535400 |
| Description | histidine triad family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 26753631-26757287 Nucleotide Length: 486 |
| Protein-coding | LOC_Os04g45280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18210 LOC_Os03g58700 LOC_Os02g01740 LOC_Os03g29240 LOC_Os02g10790 LOC_Os03g19480 |
| Downstream Genes | LOC_Os12g02730 LOC_Os11g02760 LOC_Os11g05880 LOC_Os04g52710 LOC_Os06g11140 LOC_Os04g45910 LOC_Os04g51920 LOC_Os05g33260 LOC_Os06g16390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g45280.2 |
| Rice Genome Annotation | LOC_Os04g45280.2 |
| Ricechip | LOC_Os04g45280.2 |
| KEGG | osa:4336514 dosa:Os04t0535400-01 |
| Entrez-Gene | 4336514 |