RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46000.1 View Network Show in Genome Browser |
| Other Names | Os04g0544200 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27251810-27254199 Nucleotide Length: 639 |
| Protein-coding | LOC_Os04g46000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02680 LOC_Os01g72790 LOC_Os01g32660 LOC_Os03g17700 LOC_Os03g01850 LOC_Os03g60920 LOC_Os02g03060 LOC_Os03g52750 LOC_Os01g27940 LOC_Os02g43550 LOC_Os03g41100 More.. |
| Downstream Genes | LOC_Os11g48030 LOC_Os05g01310 LOC_Os05g32360 LOC_Os06g06090 LOC_Os05g32600 LOC_Os06g27890 LOC_Os05g33040 LOC_Os07g33100 LOC_Os06g05520 LOC_Os10g38950 LOC_Os08g06060 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46000.1 |
| Rice Genome Annotation | LOC_Os04g46000.1 |
| Ricechip | LOC_Os04g46000.1 |
| KEGG | osa:4336556 dosa:Os04t0544200-01 |
| Entrez-Gene | 4336556 |