RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46010.1 View Network Show in Genome Browser |
| Other Names | Os04g0544400 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27256245-27258942 Nucleotide Length: 1536 |
| Protein-coding | LOC_Os04g46010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61030 |
| Downstream Genes | LOC_Os05g47850 LOC_Os11g23790 LOC_Os11g41910 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46010.1 |
| Rice Genome Annotation | LOC_Os04g46010.1 |
| Ricechip | LOC_Os04g46010.1 |
| KEGG | osa:4336557 dosa:Os04t0544400-00 |
| Entrez-Gene | 4336557 |