RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46130.1 View Network Show in Genome Browser |
| Other Names | Os04g0545600 |
| Description | plastocyanin-like domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27333688-27335203 Nucleotide Length: 576 |
| Protein-coding | LOC_Os04g46130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g20760 LOC_Os03g45619 LOC_Os03g61620 LOC_Os02g57120 LOC_Os04g28620 LOC_Os04g28520 LOC_Os02g20560 |
| Downstream Genes | LOC_Os11g38010 LOC_Os11g42220 LOC_Os05g02820 LOC_Os05g11990 LOC_Os11g26340 LOC_Os08g16260 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46130.1 |
| Rice Genome Annotation | LOC_Os04g46130.1 |
| Ricechip | LOC_Os04g46130.1 |
| KEGG | osa:4336565 dosa:Os04t0545600-01 |
| Entrez-Gene | 4336565 |