RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46180.2 View Network Show in Genome Browser |
| Other Names | Os04g0546300 |
| Description | AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27353820-27357800 Nucleotide Length: 2088 |
| Protein-coding | LOC_Os04g46180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51200 LOC_Os02g05630 LOC_Os04g38870 LOC_Os02g15594 LOC_Os01g38950 LOC_Os02g36974 LOC_Os01g65230 LOC_Os02g55560 LOC_Os03g55620 LOC_Os03g43590 LOC_Os03g57450 More.. |
| Downstream Genes | LOC_Os07g32380 LOC_Os05g32600 LOC_Os06g33549 LOC_Os06g48300 LOC_Os05g51560 LOC_Os04g56450 LOC_Os12g41180 LOC_Os07g08000 LOC_Os06g27890 LOC_Os09g38030 LOC_Os09g10720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46180.2 |
| Rice Genome Annotation | LOC_Os04g46180.2 |
| Ricechip | LOC_Os04g46180.2 |
| KEGG | osa:4336568 dosa:Os04t0546300-01 |
| Entrez-Gene | 4336568 |