RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46280.1 View Network Show in Genome Browser |
| Other Names | Os04g0547900 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27423442-27426229 Nucleotide Length: 1107 |
| Protein-coding | LOC_Os04g46280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g59580 LOC_Os02g50130 LOC_Os02g32060 LOC_Os02g02000 LOC_Os03g32314 LOC_Os02g54624 LOC_Os04g10350 LOC_Os04g33940 LOC_Os03g48180 |
| Downstream Genes | LOC_Os08g28840 LOC_Os06g04910 LOC_Os06g03910 LOC_Os04g58900 LOC_Os07g36190 LOC_Os04g58640 LOC_Os05g34180 LOC_Os08g28860 LOC_Os05g11870 LOC_Os07g39310 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46280.1 |
| Rice Genome Annotation | LOC_Os04g46280.1 |
| Ricechip | LOC_Os04g46280.1 |
| KEGG | osa:4336574 dosa:Os04t0547900-01 |
| Entrez-Gene | 4336574 |