RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46460.1 View Network Show in Genome Browser |
| Other Names | Os04g0550500 |
| Description | amino acid kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27563230-27564681 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os04g46460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42110 LOC_Os03g17120 LOC_Os03g60180 LOC_Os04g33300 LOC_Os01g73450 LOC_Os01g53150 LOC_Os01g74152 LOC_Os03g61829 LOC_Os02g47590 LOC_Os03g16670 LOC_Os03g13000 More.. |
| Downstream Genes | LOC_Os10g35170 LOC_Os05g38150 LOC_Os05g03830 LOC_Os07g27780 LOC_Os05g04220 LOC_Os07g44060 LOC_Os12g13320 LOC_Os11g19770 LOC_Os08g02340 LOC_Os07g06450 LOC_Os05g39770 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn01100 rn01110 rn01210 |
| Metacyc Pathways | PROSYN-PWY PROLINE-SYN2-PWY CITRULBIO-PWY ARGSYNBSUB-PWY GLUTORN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46460.1 |
| Rice Genome Annotation | LOC_Os04g46460.1 |
| Ricechip | LOC_Os04g46460.1 |
| KEGG | osa:4336590 dosa:Os04t0550500-01 |
| Entrez-Gene | 4336590 |