RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46620.1 View Network Show in Genome Browser |
| Other Names | Os04g0551800 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27638052-27643893 Nucleotide Length: 1638 |
| Protein-coding | LOC_Os04g46620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42220 LOC_Os02g14929 LOC_Os02g22780 LOC_Os02g54060 LOC_Os03g51600 LOC_Os01g51380 LOC_Os02g36710 LOC_Os03g25050 LOC_Os01g54870 LOC_Os02g41590 LOC_Os03g22880 More.. |
| Downstream Genes | LOC_Os05g48290 LOC_Os05g05470 LOC_Os06g36700 LOC_Os06g34690 LOC_Os09g26730 LOC_Os06g09679 LOC_Os06g09688 LOC_Os06g47320 LOC_Os10g37060 LOC_Os11g14220 LOC_Os07g37650 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46620.1 |
| Rice Genome Annotation | LOC_Os04g46620.1 |
| Ricechip | LOC_Os04g46620.1 |
| KEGG | osa:4336600 dosa:Os04t0551800-01 |
| Entrez-Gene | 4336600 |