RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g46960.4 View Network Show in Genome Browser |
| Other Names | Os04g0556300 |
| Description | glutathione peroxidase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 27838693-27840786 Nucleotide Length: 258 |
| Protein-coding | LOC_Os04g46960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53060 LOC_Os01g47340 LOC_Os03g08280 LOC_Os03g63430 LOC_Os01g48420 LOC_Os03g52340 LOC_Os02g33450 LOC_Os03g58630 LOC_Os02g48290 LOC_Os03g16030 LOC_Os03g16020 More.. |
| Downstream Genes | LOC_Os05g34770 LOC_Os06g22140 LOC_Os07g25420 LOC_Os06g04800 LOC_Os05g49300 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os04g56646 LOC_Os07g08840 LOC_Os07g49150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g46960.4 |
| Rice Genome Annotation | LOC_Os04g46960.4 |
| Ricechip | LOC_Os04g46960.4 |
| KEGG | osa:4336627 dosa:Os04t0556300-01 |
| Entrez-Gene | 4336627 |