RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g47160.1 View Network Show in Genome Browser |
| Other Names | Os04g0559000 |
| Description | OsSub44 - Putative Subtilisin homologue, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28001629-28003911 Nucleotide Length: 2283 |
| Protein-coding | LOC_Os04g47160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0030312 | external encapsulating structure | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g37984 LOC_Os02g47210 LOC_Os03g25920 LOC_Os03g25840 LOC_Os03g25869 |
| Downstream Genes | LOC_Os08g41370 LOC_Os12g39080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g47160.1 |
| Rice Genome Annotation | LOC_Os04g47160.1 |
| Ricechip | LOC_Os04g47160.1 |
| KEGG | osa:4336642 dosa:Os04t0559000-00 |
| Entrez-Gene | 4336642 |