RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g47180.1 View Network Show in Genome Browser |
| Other Names | Os04g0559200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28015611-28021961 Nucleotide Length: 2595 |
| Protein-coding | LOC_Os04g47180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57460 LOC_Os04g43820 LOC_Os03g52630 LOC_Os03g63540 LOC_Os03g03164 |
| Downstream Genes | LOC_Os07g10770 LOC_Os06g17390 LOC_Os05g11990 LOC_Os10g42390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g47180.1 |
| Rice Genome Annotation | LOC_Os04g47180.1 |
| Ricechip | LOC_Os04g47180.1 |
| KEGG | osa:4336644 dosa:Os04t0559200-01 |
| Entrez-Gene | 4336644 |