RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g47270.1 View Network Show in Genome Browser |
| Other Names | Os04g0560300 |
| Description | amine oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28067096-28070371 Nucleotide Length: 2436 |
| Protein-coding | LOC_Os04g47270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53960 LOC_Os03g51220 LOC_Os04g40420 LOC_Os02g10060 LOC_Os03g10570 LOC_Os01g18320 LOC_Os03g08570 LOC_Os03g62510 LOC_Os04g01970 LOC_Os02g05680 LOC_Os01g21380 More.. |
| Downstream Genes | LOC_Os07g10490 LOC_Os12g16650 LOC_Os11g08080 LOC_Os04g59630 LOC_Os12g43590 LOC_Os11g05970 LOC_Os12g35890 LOC_Os06g38470 LOC_Os08g43060 LOC_Os09g13630 LOC_Os11g36440 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5098 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g47270.1 |
| Rice Genome Annotation | LOC_Os04g47270.1 |
| Ricechip | LOC_Os04g47270.1 |
| KEGG | osa:4336650 dosa:Os04t0560300-01 |
| Entrez-Gene | 4336650 |