RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g47410.1 View Network Show in Genome Browser |
| Other Names | Os04g0562000 |
| Description | DHHC zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28131106-28136785 Nucleotide Length: 1044 |
| Protein-coding | LOC_Os04g47410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01210 LOC_Os01g03090 LOC_Os01g49000 |
| Downstream Genes | LOC_Os05g05710 LOC_Os09g38440 LOC_Os05g41930 LOC_Os12g01170 LOC_Os11g01170 LOC_Os05g23600 LOC_Os10g27050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g47410.1 |
| Rice Genome Annotation | LOC_Os04g47410.1 |
| Ricechip | LOC_Os04g47410.1 |
| KEGG | osa:4336661 dosa:Os04t0562000-01 |
| Entrez-Gene | 4336661 |