RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g47620.1 View Network Show in Genome Browser |
| Other Names | Os04g0563900 |
| Description | protein kinase APK1B, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28262748-28265746 Nucleotide Length: 1428 |
| Protein-coding | LOC_Os04g47620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os02g15594 LOC_Os04g37904 LOC_Os02g39290 LOC_Os04g14190 LOC_Os03g18150 LOC_Os01g12720 LOC_Os04g14110 LOC_Os02g55560 LOC_Os02g08364 LOC_Os02g38780 More.. |
| Downstream Genes | LOC_Os06g33549 LOC_Os06g48300 LOC_Os05g12680 LOC_Os07g32380 LOC_Os05g23950 LOC_Os12g08070 LOC_Os06g44210 LOC_Os04g56450 LOC_Os04g52000 LOC_Os06g33530 LOC_Os09g38550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g47620.1 |
| Rice Genome Annotation | LOC_Os04g47620.1 |
| Ricechip | LOC_Os04g47620.1 |
| KEGG | osa:9268653 dosa:Os04t0563900-00 |
| Entrez-Gene | 9268653 |