RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g47970.1 View Network Show in Genome Browser |
| Other Names | Os04g0567700 |
| Description | ORM1, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28521890-28526038 Nucleotide Length: 474 |
| Protein-coding | LOC_Os04g47970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68950 LOC_Os01g68940 LOC_Os01g74000 LOC_Os02g36870 LOC_Os03g49480 LOC_Os02g52860 LOC_Os01g54580 LOC_Os01g01080 LOC_Os03g59070 LOC_Os01g61710 LOC_Os02g49590 More.. |
| Downstream Genes | LOC_Os05g33620 LOC_Os07g32570 LOC_Os06g50050 LOC_Os06g12580 LOC_Os12g07590 LOC_Os05g09550 LOC_Os04g53370 LOC_Os09g10820 LOC_Os05g33050 LOC_Os05g24601 LOC_Os08g05830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g47970.1 |
| Rice Genome Annotation | LOC_Os04g47970.1 |
| Ricechip | LOC_Os04g47970.1 |
| KEGG | osa:4336696 dosa:Os04t0567700-01 |
| Entrez-Gene | 4336696 |