RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48160.1 View Network Show in Genome Browser |
| Other Names | Os04g0569900 |
| Description | IQ calmodulin-binding motif family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28663835-28666438 Nucleotide Length: 1395 |
| Protein-coding | LOC_Os04g48160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57330 LOC_Os02g19640 LOC_Os04g31900 LOC_Os03g48140 LOC_Os02g57140 LOC_Os02g49950 LOC_Os03g55120 LOC_Os02g10060 LOC_Os03g60300 LOC_Os02g49460 |
| Downstream Genes | LOC_Os10g28420 LOC_Os05g03190 LOC_Os07g30774 LOC_Os06g29350 LOC_Os12g25690 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48160.1 |
| Rice Genome Annotation | LOC_Os04g48160.1 |
| Ricechip | LOC_Os04g48160.1 |
| KEGG | osa:4336708 dosa:Os04t0569900-01 |
| Entrez-Gene | 4336708 |