RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48170.1 View Network Show in Genome Browser |
| Other Names | Os04g0570000 |
| Description | cytochrome P450, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28672747-28677225 Nucleotide Length: 1545 |
| Protein-coding | LOC_Os04g48170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g20970 LOC_Os01g06600 LOC_Os03g17310 LOC_Os03g44500 LOC_Os01g68598 LOC_Os02g02870 LOC_Os04g15690 LOC_Os03g09980 |
| Downstream Genes | LOC_Os05g42120 LOC_Os06g37590 LOC_Os04g49530 LOC_Os12g36760 LOC_Os08g32930 LOC_Os09g37020 LOC_Os10g41020 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00627 rn01120 rn00363 rn00624 rn00945 rn01110 rn00903 rn00600 rn01100 rn00905 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48170.1 |
| Rice Genome Annotation | LOC_Os04g48170.1 |
| Ricechip | LOC_Os04g48170.1 |
| KEGG | osa:4336709 dosa:Os04t0570000-00 |
| Entrez-Gene | 4336709 |