RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48410.1 View Network Show in Genome Browser |
| Other Names | Os04g0573200 |
| Description | copper chaperone for superoxide dismutase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28874353-28877513 Nucleotide Length: 939 |
| Protein-coding | LOC_Os04g48410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07630 LOC_Os03g12290 LOC_Os02g50240 LOC_Os03g22810 LOC_Os03g50490 LOC_Os02g10290 LOC_Os04g44354 LOC_Os03g60960 LOC_Os01g59110 LOC_Os01g53420 LOC_Os01g53380 More.. |
| Downstream Genes | LOC_Os08g44770 LOC_Os04g48416 LOC_Os07g46990 LOC_Os12g03960 LOC_Os04g56400 LOC_Os11g04160 LOC_Os06g45500 LOC_Os08g10480 LOC_Os10g18530 LOC_Os09g34230 LOC_Os08g38160 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48410.1 |
| Rice Genome Annotation | LOC_Os04g48410.1 |
| Ricechip | LOC_Os04g48410.1 |
| KEGG | osa:4336726 dosa:Os04t0573200-01 |
| Entrez-Gene | 4336726 |