RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48480.1 View Network Show in Genome Browser |
| Other Names | Os04g0574100 |
| Description | exostosin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28900687-28902796 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os04g48480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13320 LOC_Os03g20850 LOC_Os01g01780 LOC_Os01g59870 |
| Downstream Genes | LOC_Os08g39550 LOC_Os06g16330 LOC_Os07g29750 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48480.1 |
| Rice Genome Annotation | LOC_Os04g48480.1 |
| Ricechip | LOC_Os04g48480.1 |
| KEGG | osa:4336729 dosa:Os04t0574100-01 |
| Entrez-Gene | 4336729 |