RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48490.1 View Network Show in Genome Browser |
| Other Names | Os04g0574200 |
| Description | fasciclin-like arabinogalactan protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28910248-28911930 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os04g48490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57460 LOC_Os02g53200 LOC_Os02g15690 LOC_Os03g08790 LOC_Os01g59870 LOC_Os03g50810 LOC_Os03g55930 LOC_Os01g42520 LOC_Os04g44440 LOC_Os02g42380 LOC_Os03g45400 More.. |
| Downstream Genes | LOC_Os12g13160 LOC_Os08g39550 LOC_Os11g43600 LOC_Os06g20320 LOC_Os09g39680 LOC_Os09g07350 LOC_Os08g23180 LOC_Os06g16330 LOC_Os08g35090 LOC_Os09g32988 LOC_Os10g19880 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48490.1 |
| Rice Genome Annotation | LOC_Os04g48490.1 |
| Ricechip | LOC_Os04g48490.1 |
| KEGG | osa:4336730 dosa:Os04t0574200-01 |
| Entrez-Gene | 4336730 |