RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48540.1 View Network Show in Genome Browser |
| Other Names | Os04g0574800 |
| Description | dihydrodipicolinate synthase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 28932065-28932886 Nucleotide Length: 822 |
| Protein-coding | LOC_Os04g48540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24020 LOC_Os03g14120 LOC_Os03g55280 LOC_Os03g02690 LOC_Os02g33610 LOC_Os03g01900 |
| Downstream Genes | LOC_Os06g09610 LOC_Os10g27190 |
| Pathways | |
|---|---|
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48540.1 |
| Rice Genome Annotation | LOC_Os04g48540.1 |
| Ricechip | LOC_Os04g48540.1 |
| KEGG | osa:4336734 dosa:Os04t0574800-00 |
| Entrez-Gene | 4336734 |