RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48750.2 View Network Show in Genome Browser |
| Other Names | Os04g0576800 |
| Description | 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29071835-29076273 Nucleotide Length: 831 |
| Protein-coding | LOC_Os04g48750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05670 LOC_Os03g45410 LOC_Os02g13110 LOC_Os01g27520 LOC_Os03g43900 LOC_Os03g54780 LOC_Os01g41630 LOC_Os04g40290 LOC_Os03g49730 LOC_Os01g61580 LOC_Os03g42010 More.. |
| Downstream Genes | LOC_Os12g39070 LOC_Os12g06810 LOC_Os06g47300 LOC_Os10g29660 LOC_Os10g40780 LOC_Os07g07010 LOC_Os06g36770 LOC_Os05g23430 LOC_Os08g02130 LOC_Os07g25590 LOC_Os05g51790 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00905 rn01100 rn01110 |
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48750.2 |
| Rice Genome Annotation | LOC_Os04g48750.2 |
| Ricechip | LOC_Os04g48750.2 |
| KEGG | osa:4336740 dosa:Os04t0576800-02 |
| Entrez-Gene | 4336740 |