RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48790.1 View Network Show in Genome Browser |
| Other Names | Os04g0577200 |
| Description | rhoGAP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29106041-29109606 Nucleotide Length: 1440 |
| Protein-coding | LOC_Os04g48790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g47580 LOC_Os02g21630 LOC_Os04g02910 LOC_Os02g04020 LOC_Os02g03230 LOC_Os03g22870 LOC_Os03g61710 LOC_Os03g08170 |
| Downstream Genes | LOC_Os07g32390 LOC_Os07g08760 LOC_Os07g05570 LOC_Os09g30414 LOC_Os07g27310 LOC_Os05g38850 LOC_Os11g13570 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48790.1 |
| Rice Genome Annotation | LOC_Os04g48790.1 |
| Ricechip | LOC_Os04g48790.1 |
| KEGG | osa:4336743 dosa:Os04t0577200-01 |
| Entrez-Gene | 4336743 |