RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48820.2 View Network Show in Genome Browser |
| Other Names | Os04g0577500 |
| Description | deoxyribonuclease tatD, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29114952-29119666 Nucleotide Length: 936 |
| Protein-coding | LOC_Os04g48820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42850 LOC_Os04g01600 LOC_Os01g74000 LOC_Os03g11120 LOC_Os01g71300 LOC_Os04g01650 LOC_Os02g08480 LOC_Os03g51080 LOC_Os04g27060 LOC_Os04g26910 LOC_Os04g01660 More.. |
| Downstream Genes | LOC_Os06g50050 LOC_Os07g44660 LOC_Os07g06440 LOC_Os04g58390 LOC_Os12g13320 LOC_Os06g07630 LOC_Os08g36320 LOC_Os12g43664 LOC_Os12g42110 LOC_Os12g42100 LOC_Os09g19920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48820.2 |
| Rice Genome Annotation | LOC_Os04g48820.2 |
| Ricechip | LOC_Os04g48820.2 |
| KEGG | osa:4336745 dosa:Os04t0577500-01 |
| Entrez-Gene | 4336745 |