RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g48940.1 View Network Show in Genome Browser |
| Other Names | Os04g0578700 |
| Description | uncharacterized mscS family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29187055-29192927 Nucleotide Length: 1575 |
| Protein-coding | LOC_Os04g48940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44770 |
| Downstream Genes | LOC_Os06g10410 LOC_Os08g40610 LOC_Os11g07450 |
| Pathways | |
|---|---|
| Metacyc Pathways | METHANOGENESIS-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g48940.1 |
| Rice Genome Annotation | LOC_Os04g48940.1 |
| Ricechip | LOC_Os04g48940.1 |
| KEGG | osa:4336755 dosa:Os04t0578700-01 |
| Entrez-Gene | 4336755 |