RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g49440.3 View Network Show in Genome Browser |
| Other Names | Os04g0583800 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29499367-29500598 Nucleotide Length: 510 |
| Protein-coding | LOC_Os04g49440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g37690 LOC_Os02g52140 LOC_Os02g03040 LOC_Os04g41900 LOC_Os02g16860 LOC_Os03g17010 |
| Downstream Genes | LOC_Os07g33330 LOC_Os06g11620 LOC_Os04g53440 LOC_Os05g35274 LOC_Os06g20010 LOC_Os09g28810 LOC_Os12g04180 LOC_Os08g09100 LOC_Os11g04390 LOC_Os08g38240 LOC_Os11g34940 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g49440.3 |
| Rice Genome Annotation | LOC_Os04g49440.3 |
| Ricechip | LOC_Os04g49440.3 |
| KEGG | osa:9269592 dosa:Os04t0583800-01 |
| Entrez-Gene | 9269592 |