RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g49590.1 View Network Show in Genome Browser |
| Other Names | Os04g0585400 |
| Description | regulatory protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29577953-29581134 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os04g49590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g49580 LOC_Os01g72780 LOC_Os03g18840 LOC_Os04g28060 LOC_Os03g52750 LOC_Os03g22880 |
| Downstream Genes | LOC_Os12g06910 LOC_Os05g08010 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395t |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g49590.1 |
| Rice Genome Annotation | LOC_Os04g49590.1 |
| Ricechip | LOC_Os04g49590.1 |
| KEGG | osa:4336791 dosa:Os04t0585400-01 |
| Entrez-Gene | 4336791 |