RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g49870.1 View Network Show in Genome Browser |
| Other Names | Os04g0588350 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29730813-29732483 Nucleotide Length: 1671 |
| Protein-coding | LOC_Os04g49870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g18010 LOC_Os03g63590 LOC_Os01g72220 LOC_Os03g16110 LOC_Os01g48210 |
| Downstream Genes | LOC_Os10g29560 LOC_Os05g46570 LOC_Os09g39590 LOC_Os12g07050 LOC_Os12g38380 LOC_Os06g48310 LOC_Os05g46560 LOC_Os11g16540 LOC_Os07g08330 LOC_Os09g02700 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g49870.1 |
| Rice Genome Annotation | LOC_Os04g49870.1 |
| Ricechip | LOC_Os04g49870.1 |
| KEGG | dosa:Os04t0588350-00 |