RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g49900.1 View Network Show in Genome Browser |
| Other Names | Os04g0588700 |
| Description | ABC transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29754938-29762118 Nucleotide Length: 3957 |
| Protein-coding | LOC_Os04g49900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g47120 LOC_Os02g18700 |
| Downstream Genes | LOC_Os05g10730 LOC_Os04g52900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g49900.1 |
| Rice Genome Annotation | LOC_Os04g49900.1 |
| Ricechip | LOC_Os04g49900.1 |
| KEGG | osa:4336810 dosa:Os04t0588700-01 |
| Entrez-Gene | 4336810 |