RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g49980.1 View Network Show in Genome Browser |
| Other Names | Os04g0589800 |
| Description | late embryogenesis abundant group 1, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29811954-29812728 Nucleotide Length: 369 |
| Protein-coding | LOC_Os04g49980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53510 LOC_Os01g67770 |
| Downstream Genes | LOC_Os10g36180 LOC_Os06g06380 LOC_Os11g26790 LOC_Os11g26760 LOC_Os11g26570 LOC_Os10g30760 LOC_Os06g48300 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g49980.1 |
| Rice Genome Annotation | LOC_Os04g49980.1 |
| Ricechip | LOC_Os04g49980.1 |
| KEGG | osa:4336815 dosa:Os04t0589800-01 |
| Entrez-Gene | 4336815 |