RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g50204.1 View Network Show in Genome Browser |
| Other Names | Os04g0592400 |
| Description | protein transport protein-related, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 29964977-29968171 Nucleotide Length: 2289 |
| Protein-coding | LOC_Os04g50204 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60350 LOC_Os02g52500 |
| Downstream Genes | LOC_Os08g23180 LOC_Os08g08030 LOC_Os04g54340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1435 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00250 rn01100 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 P121-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g50204.1 |
| Rice Genome Annotation | LOC_Os04g50204.1 |
| Ricechip | LOC_Os04g50204.1 |
| KEGG | osa:4336830 dosa:Os04t0592400-01 |
| Entrez-Gene | 4336830 |