RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g50790.1 View Network Show in Genome Browser |
| Other Names | Os04g0594400 |
| Description | RNA recognition motif, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30047180-30050483 Nucleotide Length: 945 |
| Protein-coding | LOC_Os04g50790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g30790 LOC_Os03g58580 LOC_Os02g38230 LOC_Os01g71400 LOC_Os01g59110 LOC_Os01g59100 LOC_Os02g37940 LOC_Os01g25386 LOC_Os01g71340 LOC_Os03g03034 LOC_Os03g20949 More.. |
| Downstream Genes | LOC_Os10g38930 LOC_Os06g05520 LOC_Os04g58090 LOC_Os06g06180 LOC_Os09g22450 LOC_Os09g37600 LOC_Os11g40690 LOC_Os09g27830 LOC_Os06g18000 LOC_Os09g30414 LOC_Os05g47770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g50790.1 |
| Rice Genome Annotation | LOC_Os04g50790.1 |
| Ricechip | LOC_Os04g50790.1 |
| KEGG | osa:4336842 dosa:Os04t0594400-01 |
| Entrez-Gene | 4336842 |