RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g50820.1 View Network Show in Genome Browser |
| Other Names | Os04g0594800 |
| Description | oligopeptide transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30062427-30065581 Nucleotide Length: 2214 |
| Protein-coding | LOC_Os04g50820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40450 LOC_Os01g57260 LOC_Os03g56110 LOC_Os03g04240 LOC_Os02g44500 LOC_Os03g06740 LOC_Os02g56850 LOC_Os03g04250 LOC_Os03g51050 LOC_Os03g56140 LOC_Os01g56420 More.. |
| Downstream Genes | LOC_Os05g35050 LOC_Os11g18170 LOC_Os05g05200 LOC_Os12g34380 LOC_Os08g25200 LOC_Os11g42350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g50820.1 |
| Rice Genome Annotation | LOC_Os04g50820.1 |
| Ricechip | LOC_Os04g50820.1 |
| KEGG | osa:4336844 dosa:Os04t0594800-01 |
| Entrez-Gene | 4336844 |