RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g50880.1 View Network Show in Genome Browser |
| Other Names | Os04g0596900 |
| Description | phosphoribulokinase/Uridine kinase family protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30107208-30108889 Nucleotide Length: 1209 |
| Protein-coding | LOC_Os04g50880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52170 LOC_Os03g42880 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00710 rn01100 rn01120 rn00240 |
| Metacyc Pathways | CALVIN-PWY P1-PWY PWY0-163 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g50880.1 |
| Rice Genome Annotation | LOC_Os04g50880.1 |
| Ricechip | LOC_Os04g50880.1 |
| KEGG | dosa:Os04t0596900-00 |