RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51270.2 View Network Show in Genome Browser |
| Other Names | Os04g0601700 |
| Description | vacuolar ATPase G subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30374681-30377085 Nucleotide Length: 333 |
| Protein-coding | LOC_Os04g51270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46980 LOC_Os03g23950 LOC_Os01g12260 LOC_Os02g14059 LOC_Os01g10820 LOC_Os03g08280 LOC_Os03g22180 LOC_Os01g51380 LOC_Os02g40514 LOC_Os03g38260 LOC_Os02g38440 More.. |
| Downstream Genes | LOC_Os06g45120 LOC_Os07g36470 LOC_Os08g45220 LOC_Os05g40230 LOC_Os06g35730 LOC_Os05g11710 LOC_Os06g43850 LOC_Os07g42820 LOC_Os07g47780 LOC_Os05g27940 LOC_Os09g15770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51270.2 |
| Rice Genome Annotation | LOC_Os04g51270.2 |
| Ricechip | LOC_Os04g51270.2 |
| KEGG | osa:4336883 dosa:Os04t0601700-01 |
| Entrez-Gene | 4336883 |